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Grant support

HSL gratefully acknowledges CONACYT-MEXICO for financial support (scholarship 849140). We are also thankful to DGTIC-UNAM (grant LANCAD-UNAM-DGTIC 250) for computer time. JMGV acknowledges the support of the Spanish Ministry of Science and Innovation through the Juan de la Cierva-Formation fellowship FJC2020-044053-I funded by MCIN/AEI/10.13039/501100011033. AMP and EF acknowledge the Spanish MICINN for financial support (grant No. PGC2018-095953-B-I00) and the FICyT (grant No. IDI-2021-000054).

Analysis of institutional authors

Guevara-Vela, José ManuelAuthor
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Partition of the electronic energy of the PM7 method via the interacting quantum atoms approach

Publicated to:Physical Chemistry Chemical Physics. 24 (32): 19521-19530 - 2022-08-03 24(32), DOI: 10.1039/d2cp02013k

Authors: Salazar-Lozas, Hugo; Guevara-Vela, Jose Manuel; Pendas, Angel Martin; Francisco, Evelio; Rocha-Rinza, Tomas

Affiliations

MDEA Mat Inst, C Eric Kandel 2, Madrid 28906, Spain - Author
Univ Nacl Autonoma Mexico, Inst Quim, Ciudad Univ, Ciudad De Mexico 04510, Mexico - Author
Univ Oviedo, Dept Quim Fis & Analit, Julian Claveria 8, Oviedo 33006, Spain - Author

Abstract

Partitions of the electronic energy such as that provided by the Interacting Quantum Atoms (IQA) approach have given valuable insights for numerous chemical systems and processes. Unfortunately, this kind of analysis may involve the integration of scalar fields over very irregular volumes, a condition which leads to a large and often prohibitive computational effort. These circumstances have limited the use of these energy partitions to systems comprising a few tens of atoms at most. On the other hand, semiempirical methods have proved useful in the study of systems of several thousands of atoms. Therefore, the goal of this work is to carry out partitions of the semiempirical method PM7 in compliance with the IQA approach. For this purpose, we computed one- and two-atomic energetic contributions whose sum equals the PM7 electronic energy. We illustrate how one might exploit the partition of electronic energies computed via the PM7 method by considering small organic and inorganic molecules and the energetics of individual hydrogen bond interactions within several water clusters which include (H2O)(30), (H2O)(50) and (H2O)(100). We also considered the solvation of the amphiphilic caprylate anion to exemplify how to exploit the energy partition proposed in this paper. Overall, this investigation shows how the approach put forward herein might give further insights of the interactions occurring within complex systems in physical and biological chemistry.

Keywords
AtomsBiochemistryChemical processChemical systemsComputational effortConditionElectronic energiesEnergy partitionHydrogen bondsHydrogen-bondNddo approximationsOptimizationParametersQm/mmQuantum atomsScalar fieldsSemi-empirical methodsSemiempirical methodsStatesSystems and processWate

Quality index

Bibliometric impact. Analysis of the contribution and dissemination channel

The work has been published in the journal Physical Chemistry Chemical Physics due to its progression and the good impact it has achieved in recent years, according to the agency Scopus (SJR), it has become a reference in its field. In the year of publication of the work, 2022, it was in position , thus managing to position itself as a Q1 (Primer Cuartil), in the category Physics and Astronomy (Miscellaneous).

Independientemente del impacto esperado determinado por el canal de difusión, es importante destacar el impacto real observado de la propia aportación.

Según las diferentes agencias de indexación, el número de citas acumuladas por esta publicación hasta la fecha 2025-05-15:

  • WoS: 1
  • Scopus: 1
  • OpenCitations: 1
Impact and social visibility

From the perspective of influence or social adoption, and based on metrics associated with mentions and interactions provided by agencies specializing in calculating the so-called "Alternative or Social Metrics," we can highlight as of 2025-05-15:

  • The use of this contribution in bookmarks, code forks, additions to favorite lists for recurrent reading, as well as general views, indicates that someone is using the publication as a basis for their current work. This may be a notable indicator of future more formal and academic citations. This claim is supported by the result of the "Capture" indicator, which yields a total of: 4 (PlumX).
Leadership analysis of institutional authors

This work has been carried out with international collaboration, specifically with researchers from: Mexico.